Category: Dinoflagellate genomics

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Is the dinoflagellate Amoebophrya really missing a mtDNA?
Mol Biol Evol. 2021 Feb 10;:
Authors: Kayal E, Smith DR
Abstract
Mitochondrial DNA (mtDNA) is a universal hallmark of aerob…

Mitochondrial DNA (mtDNA) is a universal hallmark of aerobic eukaryotes. That is why the recent suggestion by John et al. (2019) that the aerobic dinoflagellate Amoebophrya sp. strain AT5 (Syndiniales) lacks mtDNA was so remarkable. Here, by reanalysing recently published genomic and transcriptomic data from three Amoebophrya strains, we provide evidence of a cryptic, highly reduced mtDNA in this clade. More work is needed before one can definitively say if Amoebophrya has or does not have a…

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Adaptive responses of free-living and symbiotic microalgae to simulated future ocean conditions.
Glob Chang Biol. 2021 Feb 05;:
Authors: Chan WY, Oakeshott JG, Buerger P, Edwards OR, van Oppen MJH
…

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Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium.
Curr Biol. 2021 Feb 02;:
Authors: Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd …

Marine microalgae are a diverse group of microscopic eukaryotic and prokaryotic organisms capable of photosynthesis. They are important primary producers and carbon sinks but their physiology and persistence are severely affected by global climate change. Powerful experimental evolution technologies are being used to examine the potential of microalgae to respond adaptively to current and predicted future conditions, as well as to develop resources to facilitate species conservation and…

The green alga Ostreobium is an important coral holobiont member, playing key roles in skeletal decalcification and providing photosynthate to bleached corals that have lost their dinoflagellate endosymbionts. Ostreobium lives in the coral’s skeleton, a low-light environment with variable pH and O(2) availability. We present the Ostreobium nuclear genome and a metatranscriptomic analysis of healthy and bleached corals to improve our understanding of Ostreobium’s adaptations to its extreme…

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Peculiarities within peculiarities – dinoflagellates and their mitochondrial genomes.
Mitochondrial DNA B Resour. 2017 Apr 01;2(1):191-195
Authors: Gagat P, Mackiewicz D, Mackiewicz P
Abst…

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Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.
BMC Biol. 2021 Jan 06;19(1):1
Authors: Farhat S, Le P, …

CONCLUSION: These results expand the range of atypical genome features found in basal dinoflagellates and raise questions regarding speciation and the evolutionary mechanisms at play while parastitism was selected for in this particular unicellular lineage.

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Tissue-Biased and Species-Specific Regulation of Glutathione Peroxidase (GPx) Genes in Scallops Exposed to Toxic Dinoflagellates.
Toxins (Basel). 2020 Dec 31;13(1):
Authors: Hlaing SMM, Lou J, Cheng…