Author's posts
May 08
Building consensus around the assessment and interpretation of Symbiodiniaceae diversity
Within microeukaryotes, genetic variation and functional variation sometimes accumulate more quickly than morphological differences. To understand the evolutionary history and ecology of such lineages, it is key to examine diversity at multiple levels of organization. In the dinoflagellate family Symbiodiniaceae, which can form endosymbioses with cnidarians (e.g., corals, octocorals, sea anemones, jellyfish), other marine invertebrates (e.g., sponges, molluscs, flatworms), and protists (e.g.,…
May 04
<em>Gymnodinialimonas phycosphaerae</em> sp. nov., a phycosphere bacterium isolated from <em>Karlodinium veneficum</em>
A facultative anaerobic, Gram-negative, non-motile, rod-shaped bacterial strain, designated N5^(T), was obtained from the phycosphere microbiota of the marine planktonic dinoflagellate, Karlodinium veneficum. Strain N5^(T) showed growth on marine agar at 25 °C, pH 7 and 1 % (w/v) NaCl and produced a yellow colour. According to a phylogenetic study based on 16S rRNA gene sequences, strain N5^(T) has a lineage within the genus Gymnodinialimonas. The G+C content in the genome of strain N5^(T) is…
Apr 04
Draft Genome Sequences of Coral-Associated Bacterium <em>Hoeflea</em> sp. Strain E7-10 and Dinoflagellate-Associated Bacterium Hoeflea prorocentri PM5-8
Here, we report the draft genome sequences of Hoeflea sp. strain E7-10 and Hoeflea prorocentri PM5-8, isolated from a bleached hard coral and a culture of marine dinoflagellate, respectively. Genome sequencing for host-associated isolates Hoeflea sp. E7-10 and H. prorocentri PM5-8 can provide basic genetic information to explore potential roles in their hosts.
Mar 28
Oleaginous Heterotrophic Dinoflagellates-Crypthecodiniaceae
The heterotrophic Crypthecodinium cohnii is a major model for dinoflagellate cell biology, and a major industrial producer of docosahexaenoic acid, a key nutraceutical and added pharmaceutical compound. Despite these factors, the family Crypthecodiniaceae is not fully described, which is partly attributable to their degenerative thecal plates, as well as the lack of ribotype-referred morphological description in many taxons. We report here significant genetic distances and phylogenetic cladding…
Mar 28
Oleaginous Heterotrophic Dinoflagellates-Crypthecodiniaceae
The heterotrophic Crypthecodinium cohnii is a major model for dinoflagellate cell biology, and a major industrial producer of docosahexaenoic acid, a key nutraceutical and added pharmaceutical compound. Despite these factors, the family Crypthecodiniaceae is not fully described, which is partly attributable to their degenerative thecal plates, as well as the lack of ribotype-referred morphological description in many taxons. We report here significant genetic distances and phylogenetic cladding…
Mar 15
Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60
Mitochondrial cristae expand the surface area of respiratory membranes and ultimately allow for the evolutionary scaling of respiration with cell volume across eukaryotes. The discovery of Mic60 homologs among alphaproteobacteria, the closest extant relatives of mitochondria, suggested that cristae might have evolved from bacterial intracytoplasmic membranes (ICMs). Here, we investigated the predicted structure and function of alphaproteobacterial Mic60, and a protein encoded by an adjacent gene…
Mar 09
Transcriptomic analysis of polyketide synthesis in dinoflagellate, Prorocentrum lima
The benthic dinoflagellate Prorocentrum lima is among the most common toxic morphospecies with a cosmopolitan distribution. P. lima can produce polyketide compounds, such as okadaic acid (OA), dinophysistoxin (DTX) and their analogues, which are responsible for diarrhetic shellfish poisoning (DSP). Studying the molecular mechanism of DSP toxin biosynthesis is crucial for understanding the environmental driver influencing toxin biosynthesis as well as for better monitoring of marine ecosystems….
Mar 09
Transcriptomic analysis of polyketide synthesis in dinoflagellate, Prorocentrum lima
The benthic dinoflagellate Prorocentrum lima is among the most common toxic morphospecies with a cosmopolitan distribution. P. lima can produce polyketide compounds, such as okadaic acid (OA), dinophysistoxin (DTX) and their analogues, which are responsible for diarrhetic shellfish poisoning (DSP). Studying the molecular mechanism of DSP toxin biosynthesis is crucial for understanding the environmental driver influencing toxin biosynthesis as well as for better monitoring of marine ecosystems….
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