Category: Dinoflagellate genomics

Evidence for miRNA-mediated modulation of the host transcriptome in cnidarian-dinoflagellate symbiosis.

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Evidence for miRNA-mediated modulation of the host transcriptome in cnidarian-dinoflagellate symbiosis.
Mol Ecol. 2018 01;27(2):403-418
Authors: Baumgarten S, Cziesielski MJ, Thomas L, Michell CT, …

Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals.

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Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals.
Sci Rep. 2017 12 14;7(1):17583
Authors: …

Evolution: In Chloroplast Genomes, Anything Goes.

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Evolution: In Chloroplast Genomes, Anything Goes.
Curr Biol. 2017 12 18;27(24):R1305-R1307
Authors: Smith DR
Abstract
A new study shows that Cladophorales green algae have the most…

6.0 K microarray reveals differential transcriptomic responses in the dinoflagellate Prorocentrum minimum exposed to polychlorinated biphenyl (PCB).

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6.0 K microarray reveals differential transcriptomic responses in the dinoflagellate Prorocentrum minimum exposed to polychlorinated biphenyl (PCB).
Chemosphere. 2018 Mar;195:398-409
Authors: Wang …

Time capsules in natural sediment archives-Tracking phytoplankton population genetic diversity and adaptation over multidecadal timescales in the face of environmental change.

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Time capsules in natural sediment archives-Tracking phytoplankton population genetic diversity and adaptation over multidecadal timescales in the face of environmental change.
Evol Appl. 2018 01;11(1):11-1…

Genetic transformation of cell-walled plant and algae cells: delivering DNA through the cell wall.

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Genetic transformation of cell-walled plant and algae cells: delivering DNA through the cell wall.
Brief Funct Genomics. 2018 01 01;17(1):26-33
Authors: Ortiz-Matamoros MF, Villanueva MA, Islas-Flo…

Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids.

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Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids.
Sci Rep. 2018 01 24;8(1):1523
Authors: Jackson C, Knoll…

Fates of Evolutionarily Distinct, Plastid-type Glyceraldehyde 3-phosphate Dehydrogenase Genes in Kareniacean Dinoflagellates.

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Fates of Evolutionarily Distinct, Plastid-type Glyceraldehyde 3-phosphate Dehydrogenase Genes in Kareniacean Dinoflagellates.
J Eukaryot Microbiol. 2018 07;65(5):669-678
Authors: Kamikawa R, Yazaki…

Plastid Transcript Editing across Dinoflagellate Lineages Shows Lineage-Specific Application but Conserved Trends.

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Plastid Transcript Editing across Dinoflagellate Lineages Shows Lineage-Specific Application but Conserved Trends.
Genome Biol Evol. 2018 04 01;10(4):1019-1038
Authors: Klinger CM, Paoli L, Newby …

Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network.

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Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network.
Mol Ecol. 2018 05;27(10):2365-2380
Authors: Meng A, Corre E, Prober…